Sequence Similarity Clusters for the Entities in PDB 1J80

Entity #1 | Chains: A
RIBONUCLEASE PANCREATIC protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
RIBONUCLEASE PANCREATIC protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 29 1564
95 % 17 29 1840 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 17 29 1878
70 % 17 29 1894
50 % 17 29 1931
40 % 17 29 1915
30 % 17 29 1835

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures