Sequence Similarity Clusters for the Entities in PDB 1J80

Entity #1 | Chains: A
RIBONUCLEASE PANCREATIC protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
RIBONUCLEASE PANCREATIC protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 29 1268
95 % 17 29 1709 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 17 29 1740
70 % 17 29 1763
50 % 17 29 1788
40 % 17 29 1793
30 % 17 29 1734

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.