Sequence Similarity Clusters for the Entities in PDB 1J7Y

Entity #1 | Chains: A,C
Hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 8230
95 % 25 267 17 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.8
PDBFlex
90 % 25 267 19
70 % 31 334 17
50 % 74 759 4
40 % 75 764 7
30 % 253 1310 6
Entity #2 | Chains: B,D
Hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9582
95 % 23 253 20 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 23 258 20
70 % 30 349 14
50 % 75 759 4
40 % 76 764 7
30 % 254 1310 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures