Sequence Similarity Clusters for the Entities in PDB 1J7Y

Entity #1 | Chains: A,C
Hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 10672
95 % 22 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 23 246 21
70 % 29 327 15
50 % 70 744 4
40 % 71 749 8
30 % 229 1198 8
Entity #2 | Chains: B,D
Hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9481
95 % 21 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 21 250 19
70 % 28 341 12
50 % 71 744 4
40 % 72 749 8
30 % 230 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.