Sequence Similarity Clusters for the Entities in PDB 1J7W

Entity #1 | Chains: A,C
hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 78 214 23
95 % 90 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 91 246 21
70 % 112 327 15
50 % 274 744 4
40 % 277 749 8
30 % 656 1201 8
Entity #2 | Chains: B,D
hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9528
95 % 97 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 100 250 19
70 % 125 341 13
50 % 275 744 4
40 % 278 749 8
30 % 657 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures