Sequence Similarity Clusters for the Entities in PDB 1J7W

Entity #1 | Chains: A,C
hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 81 222 22
95 % 93 250 20 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 94 251 21
70 % 114 332 16
50 % 278 754 4
40 % 281 759 8
30 % 675 1226 8
Entity #2 | Chains: B,D
hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9881
95 % 100 250 19 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 103 255 19
70 % 127 346 14
50 % 279 754 4
40 % 282 759 8
30 % 676 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures