Sequence Similarity Clusters for the Entities in PDB 1J7W

Entity #1 | Chains: A,C
hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 78 209 26
95 % 90 240 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 91 241 35
70 % 111 322 17
50 % 272 734 5
40 % 275 739 8
30 % 647 1182 8
Entity #2 | Chains: B,D
hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9282
95 % 97 240 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 100 245 32
70 % 124 336 13
50 % 273 734 5
40 % 276 739 8
30 % 648 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.