Sequence Similarity Clusters for the Entities in PDB 1J7W

Entity #1 | Chains: A,C
hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 94 254 12
95 % 98 265 16 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 98 265 18
70 % 114 332 17
50 % 278 755 4
40 % 281 760 7
30 % 696 1299 6
Entity #2 | Chains: B,D
hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9975
95 % 100 251 19 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 103 256 21
70 % 127 347 14
50 % 279 755 4
40 % 282 760 7
30 % 697 1299 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures