Sequence Similarity Clusters for the Entities in PDB 1J7V

Entity #1 | Chains: L
INTERLEUKIN-10 protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 12220
95 % 6 7 8744 Flexibility: Medium
Max RMSD: 18.4, Avg RMSD: 9.5
PDBFlex
90 % 8 10 6531
70 % 9 11 5152
50 % 9 11 4897
40 % 9 11 4579
30 % 9 11 4127
Entity #2 | Chains: R
INTERLEUKIN-10 RECEPTOR ALPHA CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 12599
95 % 4 5 12040 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 4 5 11864
70 % 4 5 11203
50 % 4 5 10039
40 % 4 5 9080
30 % 4 5 7807

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures