Sequence Similarity Clusters for the Entities in PDB 1J7S

Entity #1 | Chains: A,C
Hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10841
95 % 127 250 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 128 251 20
70 % 153 332 14
50 % 366 754 4
40 % 371 759 8
30 % 779 1214 8
Entity #2 | Chains: B,D
Hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 84 169 50
95 % 135 250 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 138 255 19
70 % 168 346 11
50 % 367 754 4
40 % 372 759 8
30 % 780 1214 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures