Sequence Similarity Clusters for the Entities in PDB 1J7S

Entity #1 | Chains: A,C
Hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10583
95 % 123 244 30 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 124 245 31
70 % 150 326 15
50 % 360 742 4
40 % 365 747 7
30 % 763 1190 8
Entity #2 | Chains: B,D
Hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 80 163 50
95 % 131 244 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 134 249 19
70 % 165 340 13
50 % 361 742 4
40 % 366 747 7
30 % 764 1190 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.