Sequence Similarity Clusters for the Entities in PDB 1J7S

Entity #1 | Chains: A,C
Hemoglobin protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 11126
95 % 127 250 20 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 128 251 21
70 % 153 332 16
50 % 366 754 4
40 % 371 759 8
30 % 791 1226 8
Entity #2 | Chains: B,D
Hemoglobin protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 84 169 51
95 % 135 250 19 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 138 255 19
70 % 168 346 14
50 % 367 754 4
40 % 372 759 8
30 % 792 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures