Sequence Similarity Clusters for the Entities in PDB 1J7K

Entity #1 | Chains: A
HOLLIDAY JUNCTION DNA HELICASE RUVB protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54968
95 % 2 6 11751 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 6 11592
70 % 2 6 10964
50 % 3 11 4759
40 % 3 11 4506
30 % 3 11 4137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.