Sequence Similarity Clusters for the Entities in PDB 1J7K

Entity #1 | Chains: A
HOLLIDAY JUNCTION DNA HELICASE RUVB protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56736
95 % 2 6 12170 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 6 12005
70 % 2 6 11343
50 % 3 11 4926
40 % 3 11 4654
30 % 3 11 4270

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures