Sequence Similarity Clusters for the Entities in PDB 1J78

Entity #1 | Chains: A,B
vitamin D binding protein protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14178
95 % 4 6 7340 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.5
PDBFlex
90 % 4 6 7300
70 % 4 6 7087
50 % 4 6 6532
40 % 4 6 6091
30 % 4 6 5457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.