Sequence Similarity Clusters for the Entities in PDB 1J78

Entity #1 | Chains: A,B
vitamin D binding protein protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 8039
95 % 4 6 8141 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.5
PDBFlex
90 % 4 6 8064
70 % 4 6 7769
50 % 4 6 7135
40 % 4 6 6594
30 % 4 6 5766

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures