Sequence Similarity Clusters for the Entities in PDB 1J75

Entity #1 | Chains: B
5'-D(*TP*CP*GP*CP*GP*CP*G)-3' dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Tumor Stroma and Activated Macrophage Protein DLM-1 protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73707
95 % 1 1 51097
90 % 2 2 24482
70 % 2 2 22247
50 % 2 2 19249
40 % 2 2 17127
30 % 2 2 14675

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures