Sequence Similarity Clusters for the Entities in PDB 1J75

Entity #1 | Chains: B
5'-D(*TP*CP*GP*CP*GP*CP*G)-3' dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Tumor Stroma and Activated Macrophage Protein DLM-1 protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74525
95 % 1 1 51649
90 % 2 2 24761
70 % 2 2 22486
50 % 2 2 19441
40 % 2 2 17293
30 % 2 2 14819

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures