Sequence Similarity Clusters for the Entities in PDB 1J71

Entity #1 | Chains: A
Aspartic proteinase protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55691
95 % 1 1 40166
90 % 1 1 38364
70 % 1 1 34070
50 % 5 13 2695
40 % 5 13 2648
30 % 531 737 30
Entity #2 | Chains: B
Tetrapeptide Thr-Ile-Thr-Ser protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures