Sequence Similarity Clusters for the Entities in PDB 1J6W

Entity #1 | Chains: A,B
AUTOINDUCER-2 PRODUCTION PROTEIN LUXS protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 12420
95 % 1 2 11891
90 % 1 2 11702
70 % 2 3 8411
50 % 2 3 7637
40 % 7 9 3197
30 % 7 9 2987

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.