Sequence Similarity Clusters for the Entities in PDB 1J6V

Entity #1 | Chains: A
AUTOINDUCER-2 PRODUCTION PROTEIN LUXS protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 9772
95 % 5 5 9892 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 5 5 9775
70 % 5 5 9325
50 % 5 5 8422
40 % 6 10 3133
30 % 6 10 2938

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures