Sequence Similarity Clusters for the Entities in PDB 1J6V

Entity #1 | Chains: A
AUTOINDUCER-2 PRODUCTION PROTEIN LUXS protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 9506
95 % 5 5 9662 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 5 5 9547
70 % 5 5 9121
50 % 5 5 8247
40 % 6 10 3064
30 % 6 10 2875

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures