Sequence Similarity Clusters for the Entities in PDB 1J6V

Entity #1 | Chains: A
AUTOINDUCER-2 PRODUCTION PROTEIN LUXS protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 9339
95 % 5 5 9241 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 5 5 9144
70 % 5 5 8764
50 % 5 5 8002
40 % 6 10 3093
30 % 6 10 2910

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures