Sequence Similarity Clusters for the Entities in PDB 1J6V

Entity #1 | Chains: A
AUTOINDUCER-2 PRODUCTION PROTEIN LUXS protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 10618
95 % 5 5 10350 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 5 5 10220
70 % 5 5 9743
50 % 5 5 8819
40 % 6 10 3242
30 % 6 10 2980

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures