Sequence Similarity Clusters for the Entities in PDB 1J6T

Entity #1 | Chains: A
PTS SYSTEM, MANNITOL-SPECIFIC IIABC COMPONENT protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 15761
95 % 3 3 12961
90 % 3 3 12747
70 % 3 3 12007
50 % 3 3 10704
40 % 3 3 9707
30 % 3 3 8467
Entity #2 | Chains: B
Phosphocarrier protein HPr protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 13 3761
95 % 12 18 3010
90 % 12 18 3057
70 % 12 18 3023
50 % 12 18 2971
40 % 40 52 695
30 % 43 55 656

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures