Sequence Similarity Clusters for the Entities in PDB 1J6T

Entity #1 | Chains: A
PTS SYSTEM, MANNITOL-SPECIFIC IIABC COMPONENT protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 14932
95 % 3 3 12297
90 % 3 3 12100
70 % 3 3 11378
50 % 3 3 10193
40 % 3 3 9235
30 % 3 3 8040
Entity #2 | Chains: B
Phosphocarrier protein HPr protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 13 3514
95 % 12 18 2846
90 % 12 18 2892
70 % 12 18 2863
50 % 12 18 2820
40 % 40 52 652
30 % 43 55 627

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.