Sequence Similarity Clusters for the Entities in PDB 1J6T

Entity #1 | Chains: A
PTS SYSTEM, MANNITOL-SPECIFIC IIABC COMPONENT protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 15302
95 % 3 3 12594
90 % 3 3 12390
70 % 3 3 11640
50 % 3 3 10393
40 % 3 3 9424
30 % 3 3 8211
Entity #2 | Chains: B
Phosphocarrier protein HPr protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 13 3618
95 % 12 18 2916
90 % 12 18 2963
70 % 12 18 2933
50 % 12 18 2894
40 % 40 52 670
30 % 43 55 640

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.