Sequence Similarity Clusters for the Entities in PDB 1J6T

Entity #1 | Chains: A
PTS SYSTEM, MANNITOL-SPECIFIC IIABC COMPONENT protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 14281
95 % 3 3 11797
90 % 3 3 11613
70 % 3 3 10934
50 % 3 3 9805
40 % 3 3 8899
30 % 3 3 7778
Entity #2 | Chains: B
Phosphocarrier protein HPr protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 13 3358
95 % 12 18 2718
90 % 12 18 2761
70 % 12 18 2734
50 % 12 18 2687
40 % 40 52 612
30 % 43 55 597

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.