Sequence Similarity Clusters for the Entities in PDB 1J5W

Entity #1 | Chains: A,B
Glycyl-tRNA synthetase alpha chain protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36641
95 % 1 1 28707 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 27716
70 % 1 1 25031
50 % 1 5 4778
40 % 1 5 4522
30 % 1 5 4150

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.