Sequence Similarity Clusters for the Entities in PDB 1J5W

Entity #1 | Chains: A,B
Glycyl-tRNA synthetase alpha chain protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40566
95 % 1 1 34187 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 32692
70 % 1 1 29176
50 % 1 5 5094
40 % 1 5 4777
30 % 1 5 4286

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures