Sequence Similarity Clusters for the Entities in PDB 1J5W

Entity #1 | Chains: A,B
Glycyl-tRNA synthetase alpha chain protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41382
95 % 1 1 34838 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 33275
70 % 1 1 29660
50 % 1 5 5219
40 % 1 5 4896
30 % 1 5 4389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures