Sequence Similarity Clusters for the Entities in PDB 1J5K

Entity #1 | Chains: B
5'-D(*AP*TP*AP*T*TP*CP*CP*CP*TP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Heterogeneous nuclear ribonucleoprotein K protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72813
95 % 1 2 36711
90 % 1 2 35028
70 % 1 2 31108
50 % 1 2 26545
40 % 1 2 23409
30 % 12 13 4406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures