Sequence Similarity Clusters for the Entities in PDB 1J5K

Entity #1 | Chains: B
5'-D(*AP*TP*AP*T*TP*CP*CP*CP*TP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Heterogeneous nuclear ribonucleoprotein K protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72007
95 % 1 2 36296
90 % 1 2 34645
70 % 1 2 30780
50 % 1 2 26277
40 % 1 2 23169
30 % 12 13 4352

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures