Sequence Similarity Clusters for the Entities in PDB 1J5K

Entity #1 | Chains: B
5'-D(*AP*TP*AP*T*TP*CP*CP*CP*TP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Heterogeneous nuclear ribonucleoprotein K protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67254
95 % 1 2 33809
90 % 1 2 32351
70 % 1 2 28891
50 % 1 2 24775
40 % 1 2 21852
30 % 12 13 4033

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.