Sequence Similarity Clusters for the Entities in PDB 1J4U

Entity #1 | Chains: A,B,C,D
Artocarpin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 2071
95 % 4 5 2377 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 8 9 1330
70 % 10 11 1141
50 % 48 49 276
40 % 48 49 308
30 % 91 93 214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures