Sequence Similarity Clusters for the Entities in PDB 1J4T

Entity #1 | Chains: A,B,C,D,E,F,G,H
Artocarpin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3398
95 % 1 5 2258 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 5 9 1272
70 % 7 11 1087
50 % 41 49 261
40 % 41 49 277
30 % 73 93 193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.