Sequence Similarity Clusters for the Entities in PDB 1J4G

Entity #1 | Chains: A,B,C,D
Trichosanthin delta C7 protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 6184
95 % 8 11 3988 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 8 11 4017
70 % 8 12 3424
50 % 60 89 519
40 % 60 89 558
30 % 107 207 210

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.