Sequence Similarity Clusters for the Entities in PDB 1J4G

Entity #1 | Chains: A,B,C,D
Trichosanthin delta C7 protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 6619
95 % 8 11 4265 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 8 11 4302
70 % 8 12 3672
50 % 61 90 545
40 % 61 90 583
30 % 108 210 215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures