Sequence Similarity Clusters for the Entities in PDB 1J49

Entity #1 | Chains: A,B
D-LACTATE DEHYDROGENASE protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36219
95 % 2 2 12005 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.3
PDBFlex
90 % 2 2 11842
70 % 2 3 8517
50 % 2 3 7761
40 % 3 9 2669
30 % 49 81 231

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures