Sequence Similarity Clusters for the Entities in PDB 1J49

Entity #1 | Chains: A,B
D-LACTATE DEHYDROGENASE protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36662
95 % 2 2 12180 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.3
PDBFlex
90 % 2 2 12013
70 % 2 3 8636
50 % 2 3 7865
40 % 3 9 2700
30 % 49 81 235

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures