Sequence Similarity Clusters for the Entities in PDB 1J48

Entity #1 | Chains: A,B
Apoprotein of C1027 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 23841
95 % 1 3 20400 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 4 14714
70 % 1 4 13791
50 % 1 4 12240
40 % 4 18 2230
30 % 4 18 2128

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures