Sequence Similarity Clusters for the Entities in PDB 1J41

Entity #1 | Chains: A,C,E,G
Hemoglobin alpha Chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 211 25
95 % 7 242 32
90 % 7 243 33
70 % 7 324 16
50 % 20 738 4
40 % 20 743 7
30 % 106 1186 8
Entity #2 | Chains: B,D,F,H
Hemoglobin beta Chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 161 53
95 % 6 242 31
90 % 6 247 20
70 % 6 338 13
50 % 21 738 4
40 % 21 743 7
30 % 107 1186 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.