Sequence Similarity Clusters for the Entities in PDB 1J40

Entity #1 | Chains: A,C,E,G
Hemoglobin alpha Chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 208 26
95 % 8 239 34
90 % 8 240 35
70 % 8 321 17
50 % 22 730 4
40 % 22 735 8
30 % 107 1175 8
Entity #2 | Chains: B,D,F,H
Hemoglobin beta Chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 158 53
95 % 7 239 33
90 % 7 244 31
70 % 7 335 14
50 % 23 730 4
40 % 23 735 8
30 % 108 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.