Sequence Similarity Clusters for the Entities in PDB 1J3W

Entity #1 | Chains: A,B,C,D
Giding protein-mglB protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22458
95 % 1 2 9585 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 9473
70 % 1 2 9049
50 % 1 2 8180
40 % 1 2 7505
30 % 1 2 6622

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures