Sequence Similarity Clusters for the Entities in PDB 1J3W

Entity #1 | Chains: A,B,C,D
Giding protein-mglB protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22896
95 % 1 2 9735 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 9622
70 % 1 2 9188
50 % 1 2 8305
40 % 1 2 7623
30 % 1 2 6723

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures