Sequence Similarity Clusters for the Entities in PDB 1J3L

Entity #1 | Chains: A,B,C,D,E,F
Demethylmenaquinone Methyltransferase protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13574
95 % 1 1 12955 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.4
PDBFlex
90 % 1 1 12746
70 % 1 1 12000
50 % 1 1 10702
40 % 5 7 2160
30 % 5 7 2068

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures