Sequence Similarity Clusters for the Entities in PDB 1J3K

Entity #1 | Chains: A,B
Bifunctional dihydrofolate reductase-thymidylate synthase protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20232
95 % 1 5 7069 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 1 5 7051
70 % 1 5 6872
50 % 1 5 6370
40 % 1 5 5959
30 % 1 5 5334
Entity #2 | Chains: C,D
Bifunctional dihydrofolate reductase-thymidylate synthase protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 6325
95 % 1 5 6971 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 5 6956
70 % 1 5 6787
50 % 60 156 111
40 % 63 218 107
30 % 64 219 120

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures