Sequence Similarity Clusters for the Entities in PDB 1J3J

Entity #1 | Chains: A,B
Bifunctional dihydrofolate reductase-thymidylate synthase protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37290
95 % 3 5 6913 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 3 5 6893
70 % 3 5 6727
50 % 3 5 6237
40 % 3 5 5833
30 % 3 5 5220
Entity #2 | Chains: C,D
Bifunctional dihydrofolate reductase-thymidylate synthase protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 6174
95 % 3 5 6818 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 3 5 6802
70 % 3 5 6646
50 % 97 155 107
40 % 109 217 104
30 % 110 218 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.