Sequence Similarity Clusters for the Entities in PDB 1J3J

Entity #1 | Chains: A,B
Bifunctional dihydrofolate reductase-thymidylate synthase protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 13263
95 % 3 5 7023 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 3 5 7172
70 % 3 5 6973
50 % 3 5 6463
40 % 3 5 5998
30 % 3 5 5257
Entity #2 | Chains: C,D
Bifunctional dihydrofolate reductase-thymidylate synthase protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7140
95 % 3 5 7258 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 3 5 7217
70 % 3 5 7017
50 % 109 214 96
40 % 110 216 118
30 % 113 222 127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures