Sequence Similarity Clusters for the Entities in PDB 1J35

Entity #1 | Chains: A
coagulation factor IX-binding protein A chain protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 12662
95 % 3 5 12067
90 % 3 5 11875
70 % 3 9 5428
50 % 8 27 1371
40 % 16 58 662
30 % 75 205 100
Entity #2 | Chains: B
Coagulation factor IX-binding protein B chain protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 6796
95 % 3 6 7336
90 % 3 6 7303
70 % 3 9 5446
50 % 5 21 1910
40 % 17 58 662
30 % 76 205 100
Entity #3 | Chains: C
Coagulation factor IX protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45495
95 % 2 2 33967
90 % 2 5 13713
70 % 2 5 12868
50 % 2 5 11510
40 % 2 5 10444
30 % 2 5 9068

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.