Sequence Similarity Clusters for the Entities in PDB 1J35

Entity #1 | Chains: A
coagulation factor IX-binding protein A chain protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 13057
95 % 3 5 12440
90 % 3 5 12234
70 % 3 9 5597
50 % 8 27 1411
40 % 16 58 688
30 % 78 215 96
Entity #2 | Chains: B
Coagulation factor IX-binding protein B chain protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 7047
95 % 3 6 7592
90 % 3 6 7547
70 % 3 9 5615
50 % 5 21 1969
40 % 17 58 688
30 % 79 215 96
Entity #3 | Chains: C
Coagulation factor IX protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 46921
95 % 2 2 35053
90 % 2 5 14168
70 % 2 5 13286
50 % 2 5 11843
40 % 2 5 10741
30 % 2 5 9309

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.