Sequence Similarity Clusters for the Entities in PDB 1J35

Entity #1 | Chains: A
coagulation factor IX-binding protein A chain protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 12750
95 % 3 5 12147
90 % 3 5 11954
70 % 3 9 5461
50 % 8 27 1382
40 % 16 58 666
30 % 75 205 100
Entity #2 | Chains: B
Coagulation factor IX-binding protein B chain protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 6858
95 % 3 6 7383
90 % 3 6 7346
70 % 3 9 5479
50 % 5 21 1924
40 % 17 58 666
30 % 76 205 100
Entity #3 | Chains: C
Coagulation factor IX protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45943
95 % 2 2 34337
90 % 2 5 13829
70 % 2 5 12974
50 % 2 5 11603
40 % 2 5 10529
30 % 2 5 9147

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.