Sequence Similarity Clusters for the Entities in PDB 1J35

Entity #1 | Chains: A
coagulation factor IX-binding protein A chain protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 13468
95 % 3 5 12825
90 % 3 5 12616
70 % 3 9 5808
50 % 8 28 1250
40 % 16 60 616
30 % 80 220 98
Entity #2 | Chains: B
Coagulation factor IX-binding protein B chain protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 7299
95 % 3 6 7865
90 % 3 6 7815
70 % 3 9 5826
50 % 7 25 1479
40 % 17 60 616
30 % 81 220 98
Entity #3 | Chains: C
Coagulation factor IX protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 48271
95 % 2 2 36080
90 % 2 5 14625
70 % 2 5 13717
50 % 2 5 12194
40 % 2 5 11058
30 % 2 5 9604

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.