Sequence Similarity Clusters for the Entities in PDB 1J34

Entity #1 | Chains: A
coagulation factor IX-binding protein A chain protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 12831
95 % 1 5 12221
90 % 1 5 12021
70 % 1 9 5511
50 % 1 27 1393
40 % 1 58 674
30 % 21 205 102
Entity #2 | Chains: B
coagulation factor IX-binding protein B chain protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 6926
95 % 1 6 7449
90 % 1 6 7407
70 % 1 9 5529
50 % 1 21 1941
40 % 2 58 674
30 % 22 205 102
Entity #3 | Chains: C
Coagulation factor IX protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46215
95 % 1 2 34528
90 % 1 5 13929
70 % 1 5 13069
50 % 1 5 11673
40 % 1 5 10587
30 % 1 5 9194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.