Sequence Similarity Clusters for the Entities in PDB 1J34

Entity #1 | Chains: A
coagulation factor IX-binding protein A chain protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 13488
95 % 1 5 12852
90 % 1 5 12642
70 % 1 9 5813
50 % 1 28 1252
40 % 1 60 617
30 % 21 220 98
Entity #2 | Chains: B
coagulation factor IX-binding protein B chain protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 7307
95 % 1 6 7872
90 % 1 6 7824
70 % 1 9 5831
50 % 1 25 1482
40 % 2 60 617
30 % 22 220 98
Entity #3 | Chains: C
Coagulation factor IX protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48375
95 % 1 2 36164
90 % 1 5 14653
70 % 1 5 13741
50 % 1 5 12212
40 % 1 5 11075
30 % 1 5 9613

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.