Sequence Similarity Clusters for the Entities in PDB 1J31

Entity #1 | Chains: A,B,C,D
Hypothetical protein PH0642 protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25057
95 % 1 1 23380 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 1 21247
70 % 3 5 6879
50 % 3 5 6518
40 % 3 5 5911
30 % 4 7 4449

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures