Sequence Similarity Clusters for the Entities in PDB 1J30

Entity #1 | Chains: A,B
144aa long hypothetical rubrerythrin protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44659
95 % 1 1 33629 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 32140
70 % 1 1 28653
50 % 1 2 15388
40 % 1 2 13697
30 % 1 2 11724

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures