Sequence Similarity Clusters for the Entities in PDB 1J30

Entity #1 | Chains: A,B
144aa long hypothetical rubrerythrin protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38831
95 % 1 1 32848 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 31456
70 % 1 1 28128
50 % 1 2 15075
40 % 1 2 13416
30 % 1 2 11284

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures