Sequence Similarity Clusters for the Entities in PDB 1J2Q

Entity #1 | Chains: A,B,C,D,E,F,G
Proteasome alpha subunit protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 9889
95 % 2 2 4492
90 % 2 2 4509
70 % 2 2 4426
50 % 8 16 309
40 % 1004 1137 3
30 % 1751 1978 3
Entity #2 | Chains: H,I,J,K,L,M,N
Proteasome beta subunit protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 9996
95 % 1 1 10009
90 % 1 1 9880
70 % 1 1 9379
50 % 7 13 387
40 % 7 13 415
30 % 514 554 13

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.