Sequence Similarity Clusters for the Entities in PDB 1J2Q

Entity #1 | Chains: A,B,C,D,E,F,G
Proteasome alpha subunit protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 9831
95 % 2 2 4468
90 % 2 2 4485
70 % 2 2 4400
50 % 8 16 308
40 % 996 1129 3
30 % 1737 1964 3
Entity #2 | Chains: H,I,J,K,L,M,N
Proteasome beta subunit protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 9936
95 % 1 1 9943
90 % 1 1 9817
70 % 1 1 9315
50 % 7 13 385
40 % 7 13 412
30 % 510 550 13

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.