Sequence Similarity Clusters for the Entities in PDB 1J2P

Entity #1 | Chains: A,B,C,D,E,F,G
Proteasome alpha subunit protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 10437
95 % 1 2 4782 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 1 2 4808
70 % 1 2 4711
50 % 6 18 267
40 % 958 1148 3
30 % 1672 1996 3

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.