Sequence Similarity Clusters for the Entities in PDB 1J2J

Entity #1 | Chains: A
ADP-ribosylation factor 1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 6673
95 % 3 13 2378
90 % 3 13 2447
70 % 3 46 445
50 % 3 58 421
40 % 5 80 309
30 % 125 812 16
Entity #2 | Chains: B
ADP-ribosylation factor binding protein GGA1 protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74498
95 % 1 1 51794
90 % 1 1 49118
70 % 1 1 43018
50 % 1 1 36693
40 % 1 1 32301
30 % 1 1 27326

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures