Sequence Similarity Clusters for the Entities in PDB 1J2J

Entity #1 | Chains: A
ADP-ribosylation factor 1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 6412
95 % 3 13 2292
90 % 3 13 2359
70 % 3 46 413
50 % 3 58 397
40 % 5 80 293
30 % 118 768 16
Entity #2 | Chains: B
ADP-ribosylation factor binding protein GGA1 protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71888
95 % 1 1 49978
90 % 1 1 47459
70 % 1 1 41739
50 % 1 1 35696
40 % 1 1 31447
30 % 1 1 26596

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.