Sequence Similarity Clusters for the Entities in PDB 1J2J

Entity #1 | Chains: A
ADP-ribosylation factor 1 protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 6811
95 % 3 13 2448
90 % 3 13 2512
70 % 3 46 467
50 % 3 58 432
40 % 5 80 322
30 % 127 822 16
Entity #2 | Chains: B
ADP-ribosylation factor binding protein GGA1 protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75818
95 % 1 1 52659
90 % 1 1 49902
70 % 1 1 43685
50 % 1 1 37240
40 % 1 1 32783
30 % 1 1 27723

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures