Sequence Similarity Clusters for the Entities in PDB 1J2F

Entity #1 | Chains: A,B
Interferon regulatory factor 3 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18644
95 % 7 8 3672 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.8
PDBFlex
90 % 7 8 3741
70 % 7 8 3681
50 % 7 8 3596
40 % 7 8 3442
30 % 7 8 3167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5JEL 1 A Interferon regulatory factor 3 UNP residues 189-427 9606
2 5JEO 2 A Interferon regulatory factor 3 UNP residues 189-427 9606
3 3A77 1 A, B, C, D Interferon regulatory factor 3 UNP residues 189-427 9606
4 5JEJ 2 A, B Interferon regulatory factor 3 UNP residues 189-427 9606
5 1QWT 1 A, B Interferon regulatory factor 3 9606
6 5JEK 1 A, B Interferon regulatory factor 3 UNP residues 189-427 9606
7 1J2F 1 A, B Interferon regulatory factor 3 residues 170-427 9606
8 5JER 2 A, C, E, G Interferon regulatory factor 3 UNP residues 189-427 9606