Sequence Similarity Clusters for the Entities in PDB 1J2F

Entity #1 | Chains: A,B
Interferon regulatory factor 3 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 2949
95 % 7 8 3654 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.9
PDBFlex
90 % 7 8 3716
70 % 7 8 3665
50 % 7 8 3574
40 % 7 8 3444
30 % 7 8 3222

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures