Sequence Similarity Clusters for the Entities in PDB 1J2A

Entity #1 | Chains: A
cyclophilin B protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16230
95 % 3 4 13232 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 3 4 13016
70 % 3 4 12240
50 % 5 9 6058
40 % 5 9 5668
30 % 155 253 136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures