Sequence Similarity Clusters for the Entities in PDB 1J25

Entity #1 | Chains: A
ATP-dependent RNA helicase, putative protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 23215
95 % 3 4 19950 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 3 4 19413
70 % 3 4 17911
50 % 3 4 15546
40 % 3 4 13834
30 % 3 4 11844

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures