Sequence Similarity Clusters for the Entities in PDB 1J1Y

Entity #1 | Chains: A,B
PaaI protein protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 1768
95 % 2 6 2076 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 2 6 2124
70 % 2 6 2140
50 % 2 6 2146
40 % 2 6 2116
30 % 2 6 1999

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WLU 1 A phenylacetic acid degradation protein PaaI 274
2 1J1Y 1 A, B PaaI protein 274
3 2DSL 1 A, B Phenylacetic acid degradation protein PaaI 274
4 1WLV 1 A, B, C, D, E, F, G, H phenylacetic acid degradation protein PaaI 274
5 1WN3 1 A, B, C, D, E, F, G, H phenylacetic acid degradation protein PaaI 274
6 1WM6 1 A, B, C, D, E, F, G, H phenylacetic acid degradation protein PaaI 274