Sequence Similarity Clusters for the Entities in PDB 1J1Y

Entity #1 | Chains: A,B
PaaI protein protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 1730
95 % 2 6 2077 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 2 6 2129
70 % 2 6 2137
50 % 2 6 2140
40 % 2 6 2141
30 % 2 6 2049

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WLU 1 A phenylacetic acid degradation protein PaaI 274
2 1J1Y 1 A, B PaaI protein 274
3 1WLV 1 A, B, C, D, E, F, G, H phenylacetic acid degradation protein PaaI 274
4 1WN3 1 A, B, C, D, E, F, G, H phenylacetic acid degradation protein PaaI 274
5 1WM6 1 A, B, C, D, E, F, G, H phenylacetic acid degradation protein PaaI 274