Sequence Similarity Clusters for the Entities in PDB 1J1X

Entity #1 | Chains: L
lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59228
95 % 5 21 1927
90 % 5 21 1974
70 % 33 164 68
50 % 52 262 20
40 % 144 724 5
30 % 164 836 8
Entity #2 | Chains: H
Ig VH,anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 10 3609
95 % 5 21 1926
90 % 5 21 1973
70 % 5 35 1073
50 % 88 420 9
40 % 145 724 5
30 % 165 836 8
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 291 563 3
95 % 330 616 4
90 % 337 633 5
70 % 499 848 6
50 % 500 857 6
40 % 506 891 10
30 % 506 891 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.