Sequence Similarity Clusters for the Entities in PDB 1J1T

Entity #1 | Chains: A
Alginate Lyase protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64272
95 % 1 2 24589 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 23759
70 % 1 2 21600
50 % 1 2 18573
40 % 1 2 16415
30 % 1 2 13763

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures