Sequence Similarity Clusters for the Entities in PDB 1J1T

Entity #1 | Chains: A
Alginate Lyase protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59176
95 % 1 2 22850 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 22169
70 % 1 2 20322
50 % 1 2 17609
40 % 1 2 15703
30 % 1 2 13426

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.