Sequence Similarity Clusters for the Entities in PDB 1J1T

Entity #1 | Chains: A
Alginate Lyase protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59996
95 % 1 2 23189 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 22484
70 % 1 2 20614
50 % 1 2 17852
40 % 1 2 15911
30 % 1 2 13606

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures