Sequence Similarity Clusters for the Entities in PDB 1J1S

Entity #1 | Chains: A
Antiviral Protein S protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 19960
95 % 5 5 14095 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 5 13873
70 % 11 18 2291
50 % 11 18 2275
40 % 12 19 2176
30 % 97 208 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.