Sequence Similarity Clusters for the Entities in PDB 1J1R

Entity #1 | Chains: A
Antiviral Protein S protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 20446
95 % 4 5 14408 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 4 5 14187
70 % 10 18 2354
50 % 10 18 2336
40 % 11 19 2231
30 % 84 210 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures