Sequence Similarity Clusters for the Entities in PDB 1J1Q

Entity #1 | Chains: A
Antiviral protein S protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 19930
95 % 2 5 14075 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 5 13854
70 % 8 18 2288
50 % 8 18 2270
40 % 9 19 2172
30 % 60 208 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1J1Q 1 A Antiviral protein S 3527 3.2.2.22 | Details
2 1GIK 1 A ANTIVIRAL PROTEIN S 3527 3.2.2.22 | Details
3 1J1R 1 A Antiviral Protein S 3527 3.2.2.22 | Details
4 1J1S 1 A Antiviral Protein S 3527 3.2.2.22 | Details