Sequence Similarity Clusters for the Entities in PDB 1J1Q

Entity #1 | Chains: A
Antiviral protein S protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 20123
95 % 2 5 14220 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 5 13993
70 % 8 18 2310
50 % 8 18 2289
40 % 9 19 2189
30 % 60 208 215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.