Sequence Similarity Clusters for the Entities in PDB 1J1P

Entity #1 | Chains: L
lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64223
95 % 8 22 2102
90 % 8 22 2167
70 % 38 181 70
50 % 58 291 21
40 % 169 831 5
30 % 191 957 8
Entity #2 | Chains: H
Ig VH,anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 3760
95 % 8 22 2099
90 % 8 22 2164
70 % 8 39 1009
50 % 104 495 8
40 % 170 831 5
30 % 192 957 8
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 339 618 3
95 % 378 671 4
90 % 385 688 5
70 % 550 904 6
50 % 551 912 6
40 % 557 946 10
30 % 557 946 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.