Sequence Similarity Clusters for the Entities in PDB 1J1P

Entity #1 | Chains: L
lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65169
95 % 8 22 2145
90 % 8 22 2212
70 % 38 184 72
50 % 58 295 21
40 % 169 844 5
30 % 191 970 7
Entity #2 | Chains: H
Ig VH,anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 3817
95 % 8 22 2143
90 % 8 22 2210
70 % 8 39 1039
50 % 104 504 8
40 % 170 844 5
30 % 192 970 7
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 346 626 3
95 % 385 679 4
90 % 392 696 5
70 % 557 912 6
50 % 558 920 6
40 % 564 954 10
30 % 564 954 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.