Sequence Similarity Clusters for the Entities in PDB 1J1P

Entity #1 | Chains: L
lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62517
95 % 8 22 1979
90 % 8 22 2032
70 % 38 175 71
50 % 58 279 21
40 % 164 785 5
30 % 186 910 8
Entity #2 | Chains: H
Ig VH,anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 3618
95 % 8 22 1977
90 % 8 22 2030
70 % 8 36 1122
50 % 99 461 8
40 % 165 785 5
30 % 187 910 8
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 327 603 3
95 % 366 656 4
90 % 373 673 5
70 % 538 888 6
50 % 539 896 6
40 % 545 930 10
30 % 545 930 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.