Sequence Similarity Clusters for the Entities in PDB 1J1P

Entity #1 | Chains: L
lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61212
95 % 8 21 2003
90 % 8 21 2049
70 % 38 167 73
50 % 57 269 22
40 % 156 758 5
30 % 177 870 8
Entity #2 | Chains: H
Ig VH,anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 10 3779
95 % 8 21 2002
90 % 8 21 2048
70 % 8 35 1115
50 % 95 447 9
40 % 157 758 5
30 % 178 870 8
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 307 577 3
95 % 346 630 4
90 % 353 647 5
70 % 518 862 6
50 % 519 871 6
40 % 525 905 10
30 % 525 905 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.