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An Information Portal to 105906 Biological Macromolecular Structures

Crystal Structure of HyHEL-10 Fv mutant LY50F complexed with hen egg white lysozyme
Sequence Clustering and Redundancy Reduction Results
1J1O
Sequence Clusters for the Sequence Entities in PDB 1J1O
Entity #1: Chains: L - lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 54109
95% 7 21 1735
90% 7 21 1773
70% 30 148 67
50% 45 223 31
40% 126 609 8
30% 146 720 8
Entity #2: Chains: H - Ig VH,anti-lysozyme protein, length: 114 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 10 3204
95% 7 21 1734
90% 7 21 1772
70% 7 35 968
50% 77 344 12
40% 127 609 8
30% 147 720 8
Entity #3: Chains: Y - Lysozyme C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 260 496 3
95% 295 545 4
90% 302 562 4
70% 464 777 6
50% 465 786 6
40% 471 820 9
30% 471 820 14
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.