POP-OUT | CLOSE

An Information Portal to 109093 Biological Macromolecular Structures

Crystal Structure of HyHEL-10 Fv mutant LY50F complexed with hen egg white lysozyme
Sequence Clustering and Redundancy Reduction Results
1J1O
Sequence Clusters for the Sequence Entities in PDB 1J1O
Entity #1: Chains: L - lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 55695
95% 7 21 1785
90% 7 21 1828
70% 30 154 68
50% 46 235 32
40% 131 643 9
30% 151 754 8
Entity #2: Chains: H - Ig VH,anti-lysozyme protein, length: 114 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 10 3334
95% 7 21 1784
90% 7 21 1827
70% 7 35 1009
50% 81 366 11
40% 132 643 9
30% 152 754 8
Entity #3: Chains: Y - Lysozyme C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 276 525 3
95% 311 574 4
90% 318 591 5
70% 480 806 6
50% 481 815 6
40% 487 849 10
30% 487 849 16
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.