Sequence Similarity Clusters for the Entities in PDB 1J1O

Entity #1 | Chains: L
lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61111
95 % 7 21 1997
90 % 7 21 2043
70 % 35 167 73
50 % 54 268 23
40 % 149 756 5
30 % 169 868 8
Entity #2 | Chains: H
Ig VH,anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 10 3770
95 % 7 21 1996
90 % 7 21 2042
70 % 7 35 1114
50 % 91 446 9
40 % 150 756 5
30 % 170 868 8
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 305 577 3
95 % 344 630 4
90 % 351 647 5
70 % 513 862 6
50 % 514 871 6
40 % 520 905 10
30 % 520 905 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.