Sequence Similarity Clusters for the Entities in PDB 1J1O

Entity #1 | Chains: L
lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63551
95 % 7 22 2073
90 % 7 22 2132
70 % 35 179 70
50 % 55 288 21
40 % 157 814 5
30 % 178 940 8
Entity #2 | Chains: H
Ig VH,anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 11 3712
95 % 7 22 2070
90 % 7 22 2129
70 % 7 37 1093
50 % 95 481 8
40 % 158 814 5
30 % 179 940 8
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 329 607 3
95 % 368 660 4
90 % 375 677 5
70 % 537 893 6
50 % 538 901 6
40 % 544 935 10
30 % 544 935 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.