Sequence Similarity Clusters for the Entities in PDB 1J1O

Entity #1 | Chains: L
lysozyme binding Ig kappa chain V23-J2 region protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64796
95 % 7 22 2120
90 % 7 22 2185
70 % 35 182 70
50 % 55 293 21
40 % 162 840 5
30 % 183 966 7
Entity #2 | Chains: H
Ig VH,anti-lysozyme protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 11 3785
95 % 7 22 2118
90 % 7 22 2183
70 % 7 39 1024
50 % 100 502 8
40 % 163 840 5
30 % 184 966 7
Entity #3 | Chains: Y
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 343 625 3
95 % 382 678 4
90 % 389 695 5
70 % 551 911 6
50 % 552 919 6
40 % 558 953 10
30 % 558 953 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.