Sequence Similarity Clusters for the Entities in PDB 1J1N

Entity #1 | Chains: A,B
AlgQ2 protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 11857
95 % 2 7 7590 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.2
PDBFlex
90 % 2 7 7529
70 % 5 14 3946
50 % 5 14 3825
40 % 5 19 1948
30 % 6 26 1237

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures