Sequence Similarity Clusters for the Entities in PDB 1J1N

Entity #1 | Chains: A,B
AlgQ2 protein, length: 492 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 10318
95 % 2 7 6765 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.9
PDBFlex
90 % 2 7 6745
70 % 5 14 3509
50 % 5 14 3407
40 % 5 19 1786
30 % 5 19 1743

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures