Sequence Similarity Clusters for the Entities in PDB 1J1M

Entity #1 | Chains: A
Ricin protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56984
95 % 6 50 843 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 6 52 806
70 % 6 52 849
50 % 6 52 901
40 % 6 77 625
30 % 17 208 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.