Sequence Similarity Clusters for the Entities in PDB 1J1J

Entity #1 | Chains: A,B,C,D
Translin protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 1830
95 % 1 5 1982 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 1 5 2032
70 % 1 5 2041
50 % 2 10 1244
40 % 2 10 1264
30 % 2 10 1241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.