Sequence Similarity Clusters for the Entities in PDB 1J1J

Entity #1 | Chains: A,B,C,D
Translin protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 1949
95 % 1 5 2087 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 1 5 2135
70 % 1 5 2136
50 % 2 10 1301
40 % 2 10 1315
30 % 2 10 1286

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures