Sequence Similarity Clusters for the Entities in PDB 1J1E

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 12221
95 % 4 10 5397
90 % 4 10 5407
70 % 14 26 1528
50 % 139 207 106
40 % 192 325 30
30 % 213 351 43
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 14496
95 % 3 3 13632
90 % 3 3 13381
70 % 3 3 12560
50 % 3 5 8396
40 % 3 5 7709
30 % 3 5 6814
Entity #3 | Chains: C,F
Troponin I protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38991
95 % 1 1 29527
90 % 1 1 28311
70 % 1 1 25427
50 % 1 2 16558
40 % 1 2 14780
30 % 1 2 12635

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.