Sequence Similarity Clusters for the Entities in PDB 1J1E

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 13606
95 % 4 10 6048
90 % 4 10 6049
70 % 14 26 1703
50 % 147 221 113
40 % 201 344 38
30 % 222 371 53
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 16195
95 % 3 3 15153
90 % 3 3 14878
70 % 3 3 13938
50 % 3 5 9272
40 % 3 5 8478
30 % 3 5 7468
Entity #3 | Chains: C,F
Troponin I protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43202
95 % 1 1 32706
90 % 1 1 31273
70 % 1 1 27901
50 % 1 2 18173
40 % 1 2 16194
30 % 1 2 13850

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures