Sequence Similarity Clusters for the Entities in PDB 1J1E

Entity #1 | Chains: A,D
Troponin C protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 12765
95 % 4 10 5644
90 % 4 10 5644
70 % 14 26 1596
50 % 140 209 110
40 % 193 329 32
30 % 215 358 47
Entity #2 | Chains: B,E
Troponin T protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15171
95 % 3 3 14256
90 % 3 3 13988
70 % 3 3 13100
50 % 3 5 8735
40 % 3 5 7996
30 % 3 5 7042
Entity #3 | Chains: C,F
Troponin I protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40720
95 % 1 1 30841
90 % 1 1 29548
70 % 1 1 26495
50 % 1 2 17254
40 % 1 2 15388
30 % 1 2 13152

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.